Welcome to the SAENOPY Documentation¶
SAENOPY a python implementation of the SAENO - Semi-affine Elastic Network Optimizer, originally developed by Julian Steinwachs.
Contents
Installation¶
Saenopy can be installed directly using pip:
pip install saenopy
Citing Saenopy¶
If you use Saenopy for academic research, you are highly encouraged (though not required) to cite the following papers:
Steinwachs J., Metzner C., Skodzek K., Lang N., Thievessen I., Mark C., Munster S., Aifantis K. E., Fabry B. (2016) “Three-dimensional force microscopy of cells in biopolymer networks”. In Nat Methods, volume 13, 2016. doi.org/10.1038/nmeth.3685
Condor M., Steinwachs J., Mark C., Garcia-Aznar J. M., Fabry B. (2017) “Traction Force Microscopy in 3-Dimensional Extracellular Matrix Networks” In Curr Protoc Cell Biol, volume 75, doi.org/10.1002/cpcb.24